Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm24548-201ENSMUST00000158650 108 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm43133-201ENSMUST00000197472 463 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Casc4Q6P2L7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Casc4Q6P2L7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Casc4Q6P2L7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Casc4Q6P2L7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms