Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.71□□□□□ -0.38
Sp140Q6NSQ5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm7809-201ENSMUST00000153199 742 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm25927-201ENSMUST00000175058 117 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Daam2-202ENSMUST00000224595 1926 ntBASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sp140Q6NSQ5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm13492-201ENSMUST00000119772 665 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm11597-201ENSMUST00000121423 964 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm8738-201ENSMUST00000172606 329 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm7063-201ENSMUST00000186840 981 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sp140Q6NSQ5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms