Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt39Q6IFX4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Gm8602-201ENSMUST00000184045 607 ntBASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Gm5035-201ENSMUST00000215581 927 ntBASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Gm32025-201ENSMUST00000217960 307 ntBASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt39Q6IFX4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.83□□□□□ -0.19
Krt39Q6IFX4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Krt39Q6IFX4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.83□□□□□ -0.2
Krt39Q6IFX4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm10146-201ENSMUST00000072739 309 ntBASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.83□□□□□ -0.2
Krt39Q6IFX4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt39Q6IFX4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt39Q6IFX4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms