Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm13297-201ENSMUST00000120205 934 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm27243-201ENSMUST00000183964 521 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm38341-201ENSMUST00000195357 515 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm8099-201ENSMUST00000200510 742 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm7783-201ENSMUST00000204795 781 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.1□□□□□ -0.47
Sdc3Q64519 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.1□□□□□ -0.47
Sdc3Q64519 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.1□□□□□ -0.47
Sdc3Q64519 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sdc3Q64519 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sdc3Q64519 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.09□□□□□ -0.47
Sdc3Q64519 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm7046-201ENSMUST00000221351 977 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm22058-201ENSMUST00000083393 310 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Mir339-201ENSMUST00000083659 96 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.09□□□□□ -0.47
Sdc3Q64519 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.09□□□□□ -0.47
Sdc3Q64519 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sdc3Q64519 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sdc3Q64519 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Sdc3Q64519 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.08□□□□□ -0.48
Sdc3Q64519 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.08□□□□□ -0.48
Sdc3Q64519 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Gm24548-201ENSMUST00000158650 108 ntBASIC12.08□□□□□ -0.48
Sdc3Q64519 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.08□□□□□ -0.48
Sdc3Q64519 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.08□□□□□ -0.48
Sdc3Q64519 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sdc3Q64519 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms