Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gm44069-201ENSMUST00000204898 506 ntBASIC9.07□□□□□ -0.96
Ndufa4Q62425 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Gm9063-201ENSMUST00000223299 582 ntBASIC9.07□□□□□ -0.96
Ndufa4Q62425 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Ndufa4Q62425 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm14350-201ENSMUST00000116642 640 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm14760-201ENSMUST00000121831 999 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm24513-201ENSMUST00000174964 138 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm21854-201ENSMUST00000179901 471 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm16372-201ENSMUST00000073088 450 ntBASIC9.06□□□□□ -0.96
Ndufa4Q62425 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ndufa4Q62425 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.05□□□□□ -0.96
Ndufa4Q62425 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ndufa4Q62425 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms