Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SspnQ62147 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SspnQ62147 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SspnQ62147 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SspnQ62147 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SspnQ62147 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SspnQ62147 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.54□□□□□ -0.72
SspnQ62147 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SspnQ62147 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SspnQ62147 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.53□□□□□ -0.72
SspnQ62147 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.53□□□□□ -0.72
SspnQ62147 Gm8213-201ENSMUST00000118191 441 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Gm13813-201ENSMUST00000120998 787 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.53□□□□□ -0.72
SspnQ62147 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm8810-201ENSMUST00000172895 754 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SspnQ62147 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.53□□□□□ -0.72
SspnQ62147 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SspnQ62147 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.53□□□□□ -0.72
SspnQ62147 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.53□□□□□ -0.72
SspnQ62147 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.53□□□□□ -0.72
SspnQ62147 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SspnQ62147 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SspnQ62147 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.52□□□□□ -0.72
SspnQ62147 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
SspnQ62147 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SspnQ62147 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.52□□□□□ -0.72
SspnQ62147 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.52□□□□□ -0.72
SspnQ62147 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SspnQ62147 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SspnQ62147 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.52□□□□□ -0.72
SspnQ62147 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.52□□□□□ -0.73
SspnQ62147 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SspnQ62147 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 Gm12203-201ENSMUST00000118235 598 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Gm13369-201ENSMUST00000119442 987 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Gm11803-201ENSMUST00000119966 444 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Gm12209-201ENSMUST00000120089 596 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Gm14704-201ENSMUST00000120300 874 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Gm12138-201ENSMUST00000122180 951 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Mir1894-201ENSMUST00000122802 81 ntBASIC10.52□□□□□ -0.73
SspnQ62147 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SspnQ62147 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms