Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.82□□□□□ -0.68
Hes3Q61657 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.82□□□□□ -0.68
Hes3Q61657 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.82□□□□□ -0.68
Hes3Q61657 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Hes3Q61657 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hes3Q61657 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hes3Q61657 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hes3Q61657 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hes3Q61657 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hes3Q61657 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.81□□□□□ -0.68
Hes3Q61657 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.81□□□□□ -0.68
Hes3Q61657 Gm27839-201ENSMUST00000184242 106 ntBASIC10.81□□□□□ -0.68
Hes3Q61657 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.81□□□□□ -0.68
Hes3Q61657 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hes3Q61657 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hes3Q61657 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.81□□□□□ -0.68
Hes3Q61657 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Hes3Q61657 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.81□□□□□ -0.68
Hes3Q61657 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.81□□□□□ -0.68
Hes3Q61657 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hes3Q61657 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hes3Q61657 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Hes3Q61657 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hes3Q61657 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.8□□□□□ -0.68
Hes3Q61657 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.8□□□□□ -0.68
Hes3Q61657 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.8□□□□□ -0.68
Hes3Q61657 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Gm22331-201ENSMUST00000158066 136 ntBASIC10.8□□□□□ -0.68
Hes3Q61657 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hes3Q61657 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.8□□□□□ -0.68
Hes3Q61657 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.8□□□□□ -0.68
Hes3Q61657 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.8□□□□□ -0.68
Hes3Q61657 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.8□□□□□ -0.68
Hes3Q61657 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.8□□□□□ -0.68
Hes3Q61657 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms