Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ift88Q61371 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.85□□□□□ -0.19
Ift88Q61371 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ift88Q61371 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.85□□□□□ -0.19
Ift88Q61371 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.85□□□□□ -0.19
Ift88Q61371 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.85□□□□□ -0.19
Ift88Q61371 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ift88Q61371 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.85□□□□□ -0.19
Ift88Q61371 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ift88Q61371 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.85□□□□□ -0.19
Ift88Q61371 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.85□□□□□ -0.19
Ift88Q61371 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ift88Q61371 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.85□□□□□ -0.19
Ift88Q61371 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.85□□□□□ -0.19
Ift88Q61371 Gm10146-201ENSMUST00000072739 309 ntBASIC13.85□□□□□ -0.19
Ift88Q61371 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.85□□□□□ -0.19
Ift88Q61371 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ift88Q61371 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.85□□□□□ -0.19
Ift88Q61371 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.84□□□□□ -0.19
Ift88Q61371 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ift88Q61371 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm12384-201ENSMUST00000119228 919 ntBASIC13.84□□□□□ -0.19
Ift88Q61371 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.84□□□□□ -0.19
Ift88Q61371 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.84□□□□□ -0.19
Ift88Q61371 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ift88Q61371 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.84□□□□□ -0.19
Ift88Q61371 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ift88Q61371 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.84□□□□□ -0.19
Ift88Q61371 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.84□□□□□ -0.19
Ift88Q61371 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ift88Q61371 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ift88Q61371 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms