Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Gm12241-201ENSMUST00000118330 726 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Gm9083-201ENSMUST00000120423 819 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Six4Q61321 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
Six4Q61321 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Gm9630-201ENSMUST00000178304 885 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.64□□□□□ -0.39
Six4Q61321 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.64□□□□□ -0.39
Six4Q61321 Gm6007-201ENSMUST00000208170 823 ntBASIC12.64□□□□□ -0.39
Six4Q61321 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.64□□□□□ -0.39
Six4Q61321 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Gm9368-201ENSMUST00000219348 831 ntBASIC12.64□□□□□ -0.39
Six4Q61321 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.64□□□□□ -0.39
Six4Q61321 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.63□□□□□ -0.39
Six4Q61321 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
Six4Q61321 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Six4Q61321 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Gm13570-201ENSMUST00000140763 309 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Six4Q61321 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Six4Q61321 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.63□□□□□ -0.39
Six4Q61321 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.63□□□□□ -0.39
Six4Q61321 Gm45865-201ENSMUST00000211815 945 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Six4Q61321 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.63□□□□□ -0.39
Six4Q61321 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Six4Q61321 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Six4Q61321 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.62□□□□□ -0.39
Six4Q61321 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.62□□□□□ -0.39
Six4Q61321 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Six4Q61321 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Six4Q61321 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Six4Q61321 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms