Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm25766-201ENSMUST00000104101 131 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm14274-201ENSMUST00000117182 615 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm42816-201ENSMUST00000198433 325 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col11a1Q61245 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm23680-201ENSMUST00000083162 164 ntBASIC13.74□□□□□ -0.21
Col11a1Q61245 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.73□□□□□ -0.21
Col11a1Q61245 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm13549-201ENSMUST00000118339 796 ntBASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm3726-201ENSMUST00000203110 785 ntBASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.73□□□□□ -0.21
Col11a1Q61245 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col11a1Q61245 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col11a1Q61245 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.73□□□□□ -0.21
Col11a1Q61245 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Col11a1Q61245 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.72□□□□□ -0.21
Col11a1Q61245 Gm14892-201ENSMUST00000117636 267 ntBASIC13.72□□□□□ -0.21
Col11a1Q61245 Gm15004-201ENSMUST00000119192 630 ntBASIC13.72□□□□□ -0.21
Col11a1Q61245 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.72□□□□□ -0.21
Col11a1Q61245 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.72□□□□□ -0.21
Col11a1Q61245 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.72□□□□□ -0.21
Col11a1Q61245 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.72□□□□□ -0.21
Col11a1Q61245 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col11a1Q61245 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Gm23912-201ENSMUST00000104687 87 ntBASIC13.71□□□□□ -0.21
Col11a1Q61245 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.71□□□□□ -0.21
Col11a1Q61245 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.71□□□□□ -0.21
Col11a1Q61245 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.71□□□□□ -0.21
Col11a1Q61245 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.71□□□□□ -0.21
Col11a1Q61245 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col11a1Q61245 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col11a1Q61245 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms