Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm24231-201ENSMUST00000104315 133 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm22846-201ENSMUST00000157706 270 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Col12a1Q60847 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.05□□□□□ -0.48
Col12a1Q60847 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col12a1Q60847 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.05□□□□□ -0.48
Col12a1Q60847 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm8815-201ENSMUST00000173809 620 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm8756-201ENSMUST00000183250 929 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm5599-201ENSMUST00000209602 788 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm12791-201ENSMUST00000120788 655 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm24954-201ENSMUST00000178831 110 ntBASIC12.04□□□□□ -0.48
Col12a1Q60847 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.04□□□□□ -0.48
Col12a1Q60847 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col12a1Q60847 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm17192-201ENSMUST00000169031 511 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm18123-201ENSMUST00000210874 822 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Gm5705-201ENSMUST00000066241 711 ntBASIC12.03□□□□□ -0.48
Col12a1Q60847 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col12a1Q60847 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms