Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.96□□□□□ -0.49
Nr1h4Q60641 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.96□□□□□ -0.49
Nr1h4Q60641 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.96□□□□□ -0.49
Nr1h4Q60641 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nr1h4Q60641 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.96□□□□□ -0.5
Nr1h4Q60641 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nr1h4Q60641 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Gm14057-201ENSMUST00000120631 482 ntBASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.95□□□□□ -0.5
Nr1h4Q60641 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.95□□□□□ -0.5
Nr1h4Q60641 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.95□□□□□ -0.5
Nr1h4Q60641 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nr1h4Q60641 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nr1h4Q60641 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.94□□□□□ -0.5
Nr1h4Q60641 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms