Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm6222-202ENSMUST00000182143 629 ntBASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf20Q5DTM8 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm25261-201ENSMUST00000157416 134 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm3890-201ENSMUST00000182416 207 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm43433-201ENSMUST00000196573 481 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm22058-201ENSMUST00000083393 310 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.92□□□□□ -0.02
Rnf20Q5DTM8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Gm45925-201ENSMUST00000218882 744 ntBASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf20Q5DTM8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Gm11425-201ENSMUST00000119608 498 ntBASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Mir1982-201ENSMUST00000157368 74 ntBASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms