Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Ddx49Q4FZF3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Gm11667-201ENSMUST00000119828 486 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Gm11450-201ENSMUST00000121144 333 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Gm19353-201ENSMUST00000184561 445 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Gm7593-201ENSMUST00000187246 644 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx49Q4FZF3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm15432-201ENSMUST00000121106 195 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm27627-201ENSMUST00000183644 150 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm8285-201ENSMUST00000208293 759 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gm5369-201ENSMUST00000217499 588 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx49Q4FZF3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx49Q4FZF3 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms