Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Pck2-205ENSMUST00000226352 2784 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.25□□□□□ -0.13
Gm28047Q3US59 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28047Q3US59 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gm13315-201ENSMUST00000120376 991 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gm45930-201ENSMUST00000221330 292 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.24□□□□□ -0.13
Gm28047Q3US59 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28047Q3US59 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm4984-201ENSMUST00000115987 360 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm25927-201ENSMUST00000175058 117 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm6222-202ENSMUST00000182143 629 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm22058-201ENSMUST00000083393 310 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.23□□□□□ -0.13
Gm28047Q3US59 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm28047Q3US59 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms