Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nlrc4Q3UP24 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm14999-201ENSMUST00000121039 624 ntBASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm18304-201ENSMUST00000189162 546 ntBASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm30285-201ENSMUST00000214614 422 ntBASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nlrc4Q3UP24 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nlrc4Q3UP24 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm38341-201ENSMUST00000195357 515 ntBASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm43822-201ENSMUST00000200285 476 ntBASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm21769-201ENSMUST00000211922 111 ntBASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm10076-201ENSMUST00000073238 384 ntBASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms