Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col5a2Q3U962 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm13182-201ENSMUST00000122241 312 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm45575-201ENSMUST00000210283 548 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm25076-201ENSMUST00000104098 132 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm11663-201ENSMUST00000117888 290 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm3551-201ENSMUST00000190750 664 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.69□□□□□ -0.06
Col5a2Q3U962 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col5a2Q3U962 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm14193-201ENSMUST00000105067 153 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm8815-201ENSMUST00000173809 620 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm8956-201ENSMUST00000203939 825 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.68□□□□□ -0.06
Col5a2Q3U962 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col5a2Q3U962 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms