Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm13385-201ENSMUST00000121089 220 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Rprl2-201ENSMUST00000157150 290 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm27631-201ENSMUST00000184163 466 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Mir7023-201ENSMUST00000185093 64 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm42599-201ENSMUST00000201308 469 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccbe1Q3MI99 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Mir449b-201ENSMUST00000104833 80 ntBASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gm5745-201ENSMUST00000183748 313 ntBASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gm7774-201ENSMUST00000200064 533 ntBASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccbe1Q3MI99 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms