Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm23119-201ENSMUST00000158610 140 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm16547-201ENSMUST00000159474 293 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 AC118639.1-202ENSMUST00000226957 653 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm6158-201ENSMUST00000109467 904 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm11660-201ENSMUST00000120955 412 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Gm8146-201ENSMUST00000192106 1847 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 CT573047.1-201ENSMUST00000223652 851 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ush2AQ2QI47 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm20781-201ENSMUST00000193154 693 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm21736-201ENSMUST00000195399 693 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm15549-201ENSMUST00000121595 622 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm7805-201ENSMUST00000154348 448 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Gm17782-201ENSMUST00000174345 880 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 AC134913.2-201ENSMUST00000225017 771 ntBASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ush2AQ2QI47 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Gm13898-201ENSMUST00000141865 610 ntBASIC6.39□□□□□ -1.39
Ush2AQ2QI47 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Gm8601-201ENSMUST00000182096 909 ntBASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Gm31274-201ENSMUST00000197356 229 ntBASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ush2AQ2QI47 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms