Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Sox4Q06831 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox4Q06831 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox4Q06831 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox4Q06831 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm25043-201ENSMUST00000158604 212 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm26956-201ENSMUST00000182176 986 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm7783-201ENSMUST00000204795 781 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Gm39404-201ENSMUST00000216350 313 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Sox4Q06831 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox4Q06831 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.34□□□□□ -0.43
Sox4Q06831 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox4Q06831 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox4Q06831 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox4Q06831 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox4Q06831 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Sox4Q06831 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox4Q06831 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm24231-201ENSMUST00000104315 133 ntBASIC12.33□□□□□ -0.44
Sox4Q06831 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm7584-201ENSMUST00000175829 940 ntBASIC12.33□□□□□ -0.44
Sox4Q06831 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.33□□□□□ -0.44
Sox4Q06831 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.33□□□□□ -0.44
Sox4Q06831 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox4Q06831 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
Sox4Q06831 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox4Q06831 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox4Q06831 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms