Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.88□□□□□ -0.51
Nkx3-2P97503 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm26083-201ENSMUST00000157904 193 ntBASIC11.88□□□□□ -0.51
Nkx3-2P97503 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.88□□□□□ -0.51
Nkx3-2P97503 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.88□□□□□ -0.51
Nkx3-2P97503 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx3-2P97503 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.87□□□□□ -0.51
Nkx3-2P97503 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm27243-201ENSMUST00000183964 521 ntBASIC11.87□□□□□ -0.51
Nkx3-2P97503 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.87□□□□□ -0.51
Nkx3-2P97503 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx3-2P97503 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms