Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.54□□□□□ -0.72
Npas1P97459 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.54□□□□□ -0.72
Npas1P97459 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.54□□□□□ -0.72
Npas1P97459 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.54□□□□□ -0.72
Npas1P97459 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Npas1P97459 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.54□□□□□ -0.72
Npas1P97459 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Npas1P97459 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.54□□□□□ -0.72
Npas1P97459 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Npas1P97459 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Npas1P97459 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.53□□□□□ -0.72
Npas1P97459 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Gm27430-201ENSMUST00000184585 107 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Gm43094-201ENSMUST00000196549 921 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Gm44333-201ENSMUST00000197168 107 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Gm43514-201ENSMUST00000198852 424 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.53□□□□□ -0.72
Npas1P97459 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Npas1P97459 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.53□□□□□ -0.72
Npas1P97459 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Npas1P97459 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Npas1P97459 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Npas1P97459 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Npas1P97459 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Npas1P97459 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Npas1P97459 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Npas1P97459 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm14701-201ENSMUST00000117156 348 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Gm13453-201ENSMUST00000118708 357 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.52□□□□□ -0.73
Npas1P97459 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm9522-201ENSMUST00000182394 926 ntBASIC10.52□□□□□ -0.73
Npas1P97459 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms