Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm8824-201ENSMUST00000182962 990 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm43671-201ENSMUST00000200422 433 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC8.25□□□□□ -1.09
PrkdcP97313 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm10580-201ENSMUST00000097985 396 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm10581-201ENSMUST00000097986 231 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm10582-201ENSMUST00000097987 396 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm10583-201ENSMUST00000097988 396 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PrkdcP97313 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm8574-201ENSMUST00000203207 924 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC8.25□□□□□ -1.09
PrkdcP97313 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC8.25□□□□□ -1.09
PrkdcP97313 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm17541-201ENSMUST00000080062 525 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Gm5537-201ENSMUST00000091117 1252 ntBASIC8.25□□□□□ -1.09
PrkdcP97313 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
PrkdcP97313 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.25□□□□□ -1.09
PrkdcP97313 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PrkdcP97313 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PrkdcP97313 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm9081-201ENSMUST00000182346 991 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm7082-201ENSMUST00000209880 969 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm5507-201ENSMUST00000091897 1008 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PrkdcP97313 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC8.24□□□□□ -1.09
PrkdcP97313 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC8.24□□□□□ -1.09
PrkdcP97313 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm14760-201ENSMUST00000121831 999 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC8.24□□□□□ -1.09
PrkdcP97313 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm2474-201ENSMUST00000195162 559 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Gm30055-201ENSMUST00000203175 803 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Gm26782-203ENSMUST00000227103 751 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm9791-201ENSMUST00000060997 447 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Adra1a-206ENSMUST00000225182 2337 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC8.24□□□□□ -1.09
PrkdcP97313 Gm4462-201ENSMUST00000166453 492 ntBASIC8.24□□□□□ -1.09
PrkdcP97313 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms