Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcdP82347 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.69□□□□□ -0.54
SgcdP82347 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SgcdP82347 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.69□□□□□ -0.54
SgcdP82347 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SgcdP82347 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SgcdP82347 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SgcdP82347 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcdP82347 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcdP82347 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.68□□□□□ -0.54
SgcdP82347 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.68□□□□□ -0.54
SgcdP82347 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcdP82347 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.68□□□□□ -0.54
SgcdP82347 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.68□□□□□ -0.54
SgcdP82347 Gm27701-201ENSMUST00000184498 110 ntBASIC11.68□□□□□ -0.54
SgcdP82347 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.68□□□□□ -0.54
SgcdP82347 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.68□□□□□ -0.54
SgcdP82347 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.68□□□□□ -0.54
SgcdP82347 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.68□□□□□ -0.54
SgcdP82347 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.68□□□□□ -0.54
SgcdP82347 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SgcdP82347 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SgcdP82347 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
SgcdP82347 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.67□□□□□ -0.54
SgcdP82347 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Mir1982-201ENSMUST00000157368 74 ntBASIC11.67□□□□□ -0.54
SgcdP82347 Gm5354-201ENSMUST00000182417 973 ntBASIC11.67□□□□□ -0.54
SgcdP82347 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.67□□□□□ -0.54
SgcdP82347 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SgcdP82347 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.67□□□□□ -0.54
SgcdP82347 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.67□□□□□ -0.54
SgcdP82347 Gm17330-201ENSMUST00000221047 165 ntBASIC11.67□□□□□ -0.54
SgcdP82347 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.67□□□□□ -0.54
SgcdP82347 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.67□□□□□ -0.54
SgcdP82347 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SgcdP82347 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.67□□□□□ -0.54
SgcdP82347 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.67□□□□□ -0.54
SgcdP82347 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SgcdP82347 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcdP82347 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SgcdP82347 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
SgcdP82347 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.66□□□□□ -0.54
SgcdP82347 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SgcdP82347 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms