Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lim2P56563 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lim2P56563 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.53□□□□□ -0.4
Lim2P56563 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lim2P56563 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Lim2P56563 Gm44124-201ENSMUST00000204159 472 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.53□□□□□ -0.4
Lim2P56563 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.53□□□□□ -0.4
Lim2P56563 Morn2-202ENSMUST00000227729 656 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lim2P56563 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lim2P56563 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.53□□□□□ -0.4
Lim2P56563 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.53□□□□□ -0.4
Lim2P56563 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lim2P56563 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lim2P56563 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lim2P56563 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lim2P56563 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lim2P56563 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lim2P56563 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.52□□□□□ -0.41
Lim2P56563 Gm14760-201ENSMUST00000121831 999 ntBASIC12.52□□□□□ -0.41
Lim2P56563 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.52□□□□□ -0.41
Lim2P56563 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.52□□□□□ -0.41
Lim2P56563 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.52□□□□□ -0.41
Lim2P56563 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Lim2P56563 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.52□□□□□ -0.41
Lim2P56563 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.52□□□□□ -0.41
Lim2P56563 Gm44405-201ENSMUST00000198952 126 ntBASIC12.52□□□□□ -0.41
Lim2P56563 Gm6334-201ENSMUST00000207083 228 ntBASIC12.52□□□□□ -0.41
Lim2P56563 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.52□□□□□ -0.41
Lim2P56563 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.52□□□□□ -0.41
Lim2P56563 Gm45925-201ENSMUST00000218882 744 ntBASIC12.52□□□□□ -0.41
Lim2P56563 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Lim2P56563 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lim2P56563 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lim2P56563 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.51□□□□□ -0.41
Lim2P56563 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lim2P56563 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Lim2P56563 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lim2P56563 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms