Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.37□□□□□ -0.27
NrlP54846 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NrlP54846 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.37□□□□□ -0.27
NrlP54846 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.37□□□□□ -0.27
NrlP54846 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.37□□□□□ -0.27
NrlP54846 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.37□□□□□ -0.27
NrlP54846 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NrlP54846 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NrlP54846 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NrlP54846 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NrlP54846 Gm11331-201ENSMUST00000119764 288 ntBASIC13.36□□□□□ -0.27
NrlP54846 Gm14999-201ENSMUST00000121039 624 ntBASIC13.36□□□□□ -0.27
NrlP54846 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NrlP54846 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.36□□□□□ -0.27
NrlP54846 Gm22334-201ENSMUST00000158070 133 ntBASIC13.36□□□□□ -0.27
NrlP54846 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.36□□□□□ -0.27
NrlP54846 Gm45224-201ENSMUST00000208203 414 ntBASIC13.36□□□□□ -0.27
NrlP54846 Gm45433-201ENSMUST00000209386 247 ntBASIC13.36□□□□□ -0.27
NrlP54846 Gm8959-201ENSMUST00000213150 571 ntBASIC13.36□□□□□ -0.27
NrlP54846 Gm18041-201ENSMUST00000218210 618 ntBASIC13.36□□□□□ -0.27
NrlP54846 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.36□□□□□ -0.27
NrlP54846 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.36□□□□□ -0.27
NrlP54846 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.36□□□□□ -0.27
NrlP54846 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NrlP54846 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.36□□□□□ -0.27
NrlP54846 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.35□□□□□ -0.27
NrlP54846 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.35□□□□□ -0.27
NrlP54846 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.35□□□□□ -0.27
NrlP54846 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Gm24514-201ENSMUST00000174961 285 ntBASIC13.35□□□□□ -0.27
NrlP54846 Gm5070-201ENSMUST00000177599 862 ntBASIC13.35□□□□□ -0.27
NrlP54846 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NrlP54846 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.35□□□□□ -0.27
NrlP54846 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NrlP54846 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NrlP54846 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NrlP54846 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.34□□□□□ -0.27
NrlP54846 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.34□□□□□ -0.27
NrlP54846 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.34□□□□□ -0.27
NrlP54846 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.34□□□□□ -0.27
NrlP54846 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.34□□□□□ -0.27
NrlP54846 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NrlP54846 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.34□□□□□ -0.27
NrlP54846 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NrlP54846 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.34□□□□□ -0.27
NrlP54846 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms