Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.54□□□□□ -0.24
Nub1P54729 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.54□□□□□ -0.24
Nub1P54729 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nub1P54729 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.54□□□□□ -0.24
Nub1P54729 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Nub1P54729 Gm38158-201ENSMUST00000194617 339 ntBASIC13.54□□□□□ -0.24
Nub1P54729 Gm43133-201ENSMUST00000197472 463 ntBASIC13.54□□□□□ -0.24
Nub1P54729 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.54□□□□□ -0.24
Nub1P54729 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.54□□□□□ -0.24
Nub1P54729 Gm5781-201ENSMUST00000219792 443 ntBASIC13.54□□□□□ -0.24
Nub1P54729 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.54□□□□□ -0.24
Nub1P54729 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.54□□□□□ -0.24
Nub1P54729 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nub1P54729 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.54□□□□□ -0.24
Nub1P54729 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nub1P54729 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nub1P54729 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 Gm24548-201ENSMUST00000158650 108 ntBASIC13.53□□□□□ -0.24
Nub1P54729 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Gm27572-201ENSMUST00000183702 255 ntBASIC13.53□□□□□ -0.24
Nub1P54729 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.53□□□□□ -0.24
Nub1P54729 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Nub1P54729 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.53□□□□□ -0.24
Nub1P54729 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.53□□□□□ -0.24
Nub1P54729 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nub1P54729 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nub1P54729 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.53□□□□□ -0.24
Nub1P54729 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.53□□□□□ -0.24
Nub1P54729 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nub1P54729 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nub1P54729 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.52□□□□□ -0.24
Nub1P54729 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.52□□□□□ -0.24
Nub1P54729 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nub1P54729 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nub1P54729 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nub1P54729 Gm13492-201ENSMUST00000119772 665 ntBASIC13.52□□□□□ -0.25
Nub1P54729 Gm11964-201ENSMUST00000120982 444 ntBASIC13.52□□□□□ -0.25
Nub1P54729 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.52□□□□□ -0.25
Nub1P54729 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.52□□□□□ -0.25
Nub1P54729 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms