Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Gm24934-201ENSMUST00000103764 111 ntBASIC15.79■□□□□ 0.12
Msh6P54276 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Gm17391-201ENSMUST00000171036 126 ntBASIC15.79■□□□□ 0.12
Msh6P54276 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.79■□□□□ 0.12
Msh6P54276 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Msh6P54276 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.79■□□□□ 0.12
Msh6P54276 Gm44958-201ENSMUST00000203734 736 ntBASIC15.79■□□□□ 0.12
Msh6P54276 Gm43916-201ENSMUST00000205062 967 ntBASIC15.79■□□□□ 0.12
Msh6P54276 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Msh6P54276 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Msh6P54276 Gm7851-201ENSMUST00000117574 323 ntBASIC15.78■□□□□ 0.12
Msh6P54276 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.78■□□□□ 0.12
Msh6P54276 Gm18038-201ENSMUST00000197900 485 ntBASIC15.78■□□□□ 0.12
Msh6P54276 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.78■□□□□ 0.12
Msh6P54276 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.78■□□□□ 0.12
Msh6P54276 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh6P54276 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.78■□□□□ 0.12
Msh6P54276 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh6P54276 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Msh6P54276 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Msh6P54276 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Msh6P54276 Mir6546-201ENSMUST00000184460 62 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.77■□□□□ 0.12
Msh6P54276 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Gm43962-201ENSMUST00000203898 190 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Gm270-201ENSMUST00000223010 976 ntBASIC15.77■□□□□ 0.12
Msh6P54276 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Msh6P54276 Gm9996-201ENSMUST00000070359 913 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Gm21811-201ENSMUST00000096485 930 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Msh6P54276 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.77■□□□□ 0.12
Msh6P54276 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.77■□□□□ 0.12
Msh6P54276 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.77■□□□□ 0.12
Msh6P54276 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Msh6P54276 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms