Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm15432-201ENSMUST00000121106 195 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.48□□□□□ -0.41
Atxn1P54254 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.48□□□□□ -0.41
Atxn1P54254 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Atxn1P54254 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.48□□□□□ -0.41
Atxn1P54254 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.47□□□□□ -0.41
Atxn1P54254 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Atxn1P54254 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.47□□□□□ -0.41
Atxn1P54254 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Gm11340-201ENSMUST00000119226 412 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm25043-201ENSMUST00000158604 212 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.47□□□□□ -0.41
Atxn1P54254 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm29155-201ENSMUST00000185910 269 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Atxn1P54254 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Atxn1P54254 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Atxn1P54254 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.47□□□□□ -0.41
Atxn1P54254 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.47□□□□□ -0.41
Atxn1P54254 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atxn1P54254 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.46□□□□□ -0.41
Atxn1P54254 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atxn1P54254 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atxn1P54254 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms