Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
TubP50586 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.87□□□□□ -0.35
TubP50586 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TubP50586 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TubP50586 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TubP50586 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TubP50586 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.86□□□□□ -0.35
TubP50586 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.86□□□□□ -0.35
TubP50586 Gm38266-201ENSMUST00000194931 421 ntBASIC12.86□□□□□ -0.35
TubP50586 Gm6334-201ENSMUST00000207083 228 ntBASIC12.86□□□□□ -0.35
TubP50586 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.86□□□□□ -0.35
TubP50586 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.86□□□□□ -0.35
TubP50586 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TubP50586 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TubP50586 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.86□□□□□ -0.35
TubP50586 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TubP50586 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.85□□□□□ -0.35
TubP50586 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TubP50586 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Gm13342-201ENSMUST00000121055 207 ntBASIC12.85□□□□□ -0.35
TubP50586 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.85□□□□□ -0.35
TubP50586 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Gm6621-201ENSMUST00000193251 772 ntBASIC12.85□□□□□ -0.35
TubP50586 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TubP50586 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TubP50586 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TubP50586 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.84□□□□□ -0.35
TubP50586 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TubP50586 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TubP50586 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms