Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.25□□□□□ -0.29
Shmt1P50431 Gm25668-201ENSMUST00000157700 129 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Gm27023-201ENSMUST00000182372 285 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Gm37466-201ENSMUST00000195692 652 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.25□□□□□ -0.29
Shmt1P50431 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.25□□□□□ -0.29
Shmt1P50431 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.25□□□□□ -0.29
Shmt1P50431 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.25□□□□□ -0.29
Shmt1P50431 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.25□□□□□ -0.29
Shmt1P50431 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shmt1P50431 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Shmt1P50431 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.24□□□□□ -0.29
Shmt1P50431 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shmt1P50431 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.24□□□□□ -0.29
Shmt1P50431 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shmt1P50431 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shmt1P50431 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shmt1P50431 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shmt1P50431 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.24□□□□□ -0.29
Shmt1P50431 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Shmt1P50431 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shmt1P50431 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shmt1P50431 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shmt1P50431 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm28882-201ENSMUST00000185504 314 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Mir433-201ENSMUST00000093564 124 ntBASIC13.23□□□□□ -0.29
Shmt1P50431 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Shmt1P50431 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms