Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.02□□□□□ -0.65
GdnfP48540 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Gm12928-201ENSMUST00000117115 573 ntBASIC11.02□□□□□ -0.65
GdnfP48540 Gm6447-201ENSMUST00000118905 835 ntBASIC11.02□□□□□ -0.65
GdnfP48540 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.02□□□□□ -0.65
GdnfP48540 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.02□□□□□ -0.65
GdnfP48540 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.02□□□□□ -0.65
GdnfP48540 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
GdnfP48540 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.02□□□□□ -0.65
GdnfP48540 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.02□□□□□ -0.65
GdnfP48540 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
GdnfP48540 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
GdnfP48540 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
GdnfP48540 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
GdnfP48540 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
GdnfP48540 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
GdnfP48540 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.01□□□□□ -0.65
GdnfP48540 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.01□□□□□ -0.65
GdnfP48540 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.01□□□□□ -0.65
GdnfP48540 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.01□□□□□ -0.65
GdnfP48540 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.01□□□□□ -0.65
GdnfP48540 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
GdnfP48540 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
GdnfP48540 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms