Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm29199-201ENSMUST00000187766 775 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm31256-201ENSMUST00000194705 506 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 Gm30285-201ENSMUST00000214614 422 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
Rfx2P48379 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.16□□□□□ -0.3
Rfx2P48379 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfx2P48379 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfx2P48379 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfx2P48379 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfx2P48379 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rfx2P48379 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rfx2P48379 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Rfx2P48379 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx2P48379 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Gm17376-201ENSMUST00000166016 84 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfx2P48379 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Mir433-201ENSMUST00000093564 124 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.15□□□□□ -0.3
Rfx2P48379 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.15□□□□□ -0.3
Rfx2P48379 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rfx2P48379 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfx2P48379 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Rfx2P48379 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rfx2P48379 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rfx2P48379 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rfx2P48379 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rfx2P48379 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Rfx2P48379 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rfx2P48379 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rfx2P48379 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.14□□□□□ -0.31
Rfx2P48379 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.14□□□□□ -0.31
Rfx2P48379 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.14□□□□□ -0.31
Rfx2P48379 Gm12291-201ENSMUST00000121627 311 ntBASIC13.14□□□□□ -0.31
Rfx2P48379 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.14□□□□□ -0.31
Rfx2P48379 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfx2P48379 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms