Protein–RNA interactions for Protein: P48031

Gbx2, Homeobox protein GBX-2, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx2P48031 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gbx2P48031 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gbx2P48031 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gbx2P48031 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Gbx2P48031 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Gbx2P48031 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.72□□□□□ -0.53
Gbx2P48031 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.72□□□□□ -0.53
Gbx2P48031 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.72□□□□□ -0.53
Gbx2P48031 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.72□□□□□ -0.53
Gbx2P48031 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gbx2P48031 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.72□□□□□ -0.53
Gbx2P48031 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gbx2P48031 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.71□□□□□ -0.53
Gbx2P48031 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gbx2P48031 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm11618-201ENSMUST00000117946 267 ntBASIC11.71□□□□□ -0.53
Gbx2P48031 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.71□□□□□ -0.53
Gbx2P48031 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.71□□□□□ -0.53
Gbx2P48031 Gm37917-201ENSMUST00000194711 392 ntBASIC11.71□□□□□ -0.53
Gbx2P48031 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Gbx2P48031 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.71□□□□□ -0.53
Gbx2P48031 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gbx2P48031 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gbx2P48031 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Gbx2P48031 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Gbx2P48031 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Gbx2P48031 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gbx2P48031 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.71□□□□□ -0.54
Gbx2P48031 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gbx2P48031 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gbx2P48031 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.71□□□□□ -0.54
Gbx2P48031 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Gbx2P48031 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gbx2P48031 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gbx2P48031 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Gbx2P48031 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Gbx2P48031 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gbx2P48031 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms