Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Sox18P43680 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox18P43680 Gm13047-201ENSMUST00000117116 815 ntBASIC12.16□□□□□ -0.46
Sox18P43680 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox18P43680 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox18P43680 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.16□□□□□ -0.46
Sox18P43680 Gm8365-201ENSMUST00000197334 648 ntBASIC12.16□□□□□ -0.46
Sox18P43680 Gm18660-201ENSMUST00000199542 629 ntBASIC12.16□□□□□ -0.46
Sox18P43680 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox18P43680 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox18P43680 AC153899.1-201ENSMUST00000214092 1117 ntBASIC12.16□□□□□ -0.46
Sox18P43680 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.16□□□□□ -0.46
Sox18P43680 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox18P43680 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.16□□□□□ -0.46
Sox18P43680 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sox18P43680 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sox18P43680 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox18P43680 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.16□□□□□ -0.46
Sox18P43680 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.16□□□□□ -0.46
Sox18P43680 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox18P43680 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sox18P43680 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox18P43680 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gm12795-201ENSMUST00000117594 539 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Gm11893-201ENSMUST00000117829 491 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gm8988-201ENSMUST00000155015 1240 ntBASIC12.15□□□□□ -0.46
Sox18P43680 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Gm25951-201ENSMUST00000175330 64 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Gm37201-201ENSMUST00000191845 523 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Gm32999-201ENSMUST00000192693 562 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 Gm44554-201ENSMUST00000208738 147 ntBASIC12.15□□□□□ -0.46
Sox18P43680 AC153529.1-201ENSMUST00000217818 370 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox18P43680 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox18P43680 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox18P43680 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.15□□□□□ -0.46
Sox18P43680 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox18P43680 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC12.15□□□□□ -0.46
Sox18P43680 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox18P43680 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sox18P43680 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox18P43680 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox18P43680 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.14□□□□□ -0.47
Sox18P43680 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox18P43680 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms