Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.89□□□□□ -0.51
Cdx2P43241 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdx2P43241 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdx2P43241 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Matn2-206ENSMUST00000228570 2798 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 Gm12029-201ENSMUST00000120073 832 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 Gm12196-201ENSMUST00000120954 262 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Cdx2P43241 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Rubie-203ENSMUST00000227803 2430 ntBASIC11.88□□□□□ -0.51
Cdx2P43241 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdx2P43241 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdx2P43241 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm23596-201ENSMUST00000104304 132 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Gm24231-201ENSMUST00000104315 133 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdx2P43241 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm7851-201ENSMUST00000117574 323 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Gm13888-201ENSMUST00000119148 422 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdx2P43241 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdx2P43241 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm44958-201ENSMUST00000203734 736 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdx2P43241 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdx2P43241 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdx2P43241 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdx2P43241 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.87□□□□□ -0.51
Cdx2P43241 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms