Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm13875-201ENSMUST00000120162 282 ntBASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm9083-201ENSMUST00000120423 819 ntBASIC11.48□□□□□ -0.57
Nkx2-2P42586 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm42627-201ENSMUST00000197347 224 ntBASIC11.48□□□□□ -0.57
Nkx2-2P42586 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.48□□□□□ -0.57
Nkx2-2P42586 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.48□□□□□ -0.57
Nkx2-2P42586 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-2P42586 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm13786-201ENSMUST00000122371 333 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm17420-201ENSMUST00000164753 153 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm27023-201ENSMUST00000182372 285 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm37201-201ENSMUST00000191845 523 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx2-2P42586 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx2-2P42586 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms