Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.53□□□□□ -0.72
Hmx3P42581 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.53□□□□□ -0.72
Hmx3P42581 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Hmx3P42581 Mir7023-201ENSMUST00000185093 64 ntBASIC10.53□□□□□ -0.72
Hmx3P42581 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.53□□□□□ -0.72
Hmx3P42581 Gm20949-201ENSMUST00000206478 952 ntBASIC10.53□□□□□ -0.72
Hmx3P42581 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.53□□□□□ -0.72
Hmx3P42581 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Hmx3P42581 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Hmx3P42581 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hmx3P42581 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hmx3P42581 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.52□□□□□ -0.72
Hmx3P42581 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hmx3P42581 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hmx3P42581 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hmx3P42581 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.52□□□□□ -0.73
Hmx3P42581 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hmx3P42581 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Hmx3P42581 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Hmx3P42581 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Gm24694-201ENSMUST00000180054 110 ntBASIC10.52□□□□□ -0.73
Hmx3P42581 Gm27663-201ENSMUST00000184839 110 ntBASIC10.52□□□□□ -0.73
Hmx3P42581 Gm28760-201ENSMUST00000185995 736 ntBASIC10.52□□□□□ -0.73
Hmx3P42581 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.52□□□□□ -0.73
Hmx3P42581 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.52□□□□□ -0.73
Hmx3P42581 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hmx3P42581 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hmx3P42581 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.52□□□□□ -0.73
Hmx3P42581 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hmx3P42581 Syt7-204ENSMUST00000223586 1344 ntBASIC10.52□□□□□ -0.73
Hmx3P42581 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmx3P42581 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hmx3P42581 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmx3P42581 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.51□□□□□ -0.73
Hmx3P42581 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmx3P42581 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmx3P42581 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmx3P42581 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Hmx3P42581 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms