Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kdm5cP41230 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Kdm5cP41230 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm44506-201ENSMUST00000206278 965 ntBASIC17.83■□□□□ 0.45
Kdm5cP41230 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Gm17931-201ENSMUST00000208132 634 ntBASIC17.83■□□□□ 0.45
Kdm5cP41230 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.83■□□□□ 0.45
Kdm5cP41230 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Kdm5cP41230 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Kdm5cP41230 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm25766-201ENSMUST00000104101 131 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm5621-201ENSMUST00000187303 640 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm18463-201ENSMUST00000207258 474 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm18460-201ENSMUST00000208088 464 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm8342-201ENSMUST00000209839 757 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC17.83■□□□□ 0.44
Kdm5cP41230 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.83■□□□□ 0.44
Kdm5cP41230 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Kdm5cP41230 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.83■□□□□ 0.44
Kdm5cP41230 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Gm25063-201ENSMUST00000104666 94 ntBASIC17.82■□□□□ 0.44
Kdm5cP41230 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Kdm5cP41230 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.82■□□□□ 0.44
Kdm5cP41230 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kdm5cP41230 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Kdm5cP41230 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm23272-201ENSMUST00000104053 129 ntBASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm12218-201ENSMUST00000117666 399 ntBASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm13549-201ENSMUST00000118339 796 ntBASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm13022-201ENSMUST00000121181 285 ntBASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Kdm5cP41230 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kdm5cP41230 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms