Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cdh4P39038 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cdh4P39038 Gm27501-201ENSMUST00000183599 107 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Gm37489-201ENSMUST00000191883 159 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdh4P39038 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdh4P39038 Gm45930-201ENSMUST00000221330 292 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh4P39038 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.02□□□□□ -0.48
Cdh4P39038 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.02□□□□□ -0.48
Cdh4P39038 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdh4P39038 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdh4P39038 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.02□□□□□ -0.48
Cdh4P39038 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.02□□□□□ -0.48
Cdh4P39038 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh4P39038 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm44405-201ENSMUST00000198952 126 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdh4P39038 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm7046-201ENSMUST00000221351 977 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdh4P39038 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdh4P39038 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cdh4P39038 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.02□□□□□ -0.49
Cdh4P39038 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh4P39038 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh4P39038 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdh4P39038 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm13316-201ENSMUST00000140537 691 ntBASIC12.01□□□□□ -0.49
Cdh4P39038 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdh4P39038 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
Cdh4P39038 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdh4P39038 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms