Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.5□□□□□ -0.41
LdlrP35951 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LdlrP35951 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
LdlrP35951 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LdlrP35951 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LdlrP35951 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.49□□□□□ -0.41
LdlrP35951 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Gm18473-201ENSMUST00000220543 868 ntBASIC12.49□□□□□ -0.41
LdlrP35951 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LdlrP35951 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LdlrP35951 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LdlrP35951 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.48□□□□□ -0.41
LdlrP35951 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.48□□□□□ -0.41
LdlrP35951 Gm22331-201ENSMUST00000158066 136 ntBASIC12.48□□□□□ -0.41
LdlrP35951 Mir3102-201ENSMUST00000175555 104 ntBASIC12.48□□□□□ -0.41
LdlrP35951 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.48□□□□□ -0.41
LdlrP35951 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LdlrP35951 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
LdlrP35951 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.47□□□□□ -0.41
LdlrP35951 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.47□□□□□ -0.41
LdlrP35951 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.47□□□□□ -0.41
LdlrP35951 Gm14723-201ENSMUST00000118686 215 ntBASIC12.47□□□□□ -0.41
LdlrP35951 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Gm11803-201ENSMUST00000119966 444 ntBASIC12.47□□□□□ -0.41
LdlrP35951 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Gm19309-201ENSMUST00000218295 205 ntBASIC12.47□□□□□ -0.41
LdlrP35951 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.47□□□□□ -0.41
LdlrP35951 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LdlrP35951 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LdlrP35951 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.47□□□□□ -0.41
LdlrP35951 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms