Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm12485-201ENSMUST00000119641 291 ntBASIC13.22□□□□□ -0.29
Rfc1P35601 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfc1P35601 Gm38144-201ENSMUST00000192790 465 ntBASIC13.22□□□□□ -0.29
Rfc1P35601 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfc1P35601 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfc1P35601 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfc1P35601 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfc1P35601 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.22□□□□□ -0.29
Rfc1P35601 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rfc1P35601 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.22□□□□□ -0.29
Rfc1P35601 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rfc1P35601 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfc1P35601 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.21□□□□□ -0.29
Rfc1P35601 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfc1P35601 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Rfc1P35601 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Rfc1P35601 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Gm22189-201ENSMUST00000103822 86 ntBASIC13.21□□□□□ -0.29
Rfc1P35601 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.21□□□□□ -0.29
Rfc1P35601 Gm5279-201ENSMUST00000199575 745 ntBASIC13.21□□□□□ -0.29
Rfc1P35601 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.21□□□□□ -0.29
Rfc1P35601 Gm20949-201ENSMUST00000206478 952 ntBASIC13.21□□□□□ -0.29
Rfc1P35601 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfc1P35601 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rfc1P35601 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfc1P35601 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfc1P35601 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfc1P35601 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfc1P35601 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rfc1P35601 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfc1P35601 BC043934-202ENSMUST00000185694 2356 ntBASIC13.21□□□□□ -0.3
Rfc1P35601 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfc1P35601 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.21□□□□□ -0.3
Rfc1P35601 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfc1P35601 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.2□□□□□ -0.3
Rfc1P35601 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
Rfc1P35601 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.2□□□□□ -0.3
Rfc1P35601 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.2□□□□□ -0.3
Rfc1P35601 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.2□□□□□ -0.3
Rfc1P35601 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Rfc1P35601 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rfc1P35601 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms