Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Foxa2P35583 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Foxa2P35583 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm12384-201ENSMUST00000119228 919 ntBASIC10.53□□□□□ -0.72
Foxa2P35583 Gm11964-201ENSMUST00000120982 444 ntBASIC10.53□□□□□ -0.72
Foxa2P35583 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.53□□□□□ -0.72
Foxa2P35583 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm29127-201ENSMUST00000188304 517 ntBASIC10.53□□□□□ -0.72
Foxa2P35583 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.53□□□□□ -0.72
Foxa2P35583 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxa2P35583 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxa2P35583 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Foxa2P35583 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.53□□□□□ -0.72
Foxa2P35583 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxa2P35583 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Foxa2P35583 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Foxa2P35583 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.52□□□□□ -0.72
Foxa2P35583 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxa2P35583 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.52□□□□□ -0.73
Foxa2P35583 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.52□□□□□ -0.73
Foxa2P35583 Gm1335-201ENSMUST00000121653 386 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Rmrp-201ENSMUST00000157463 271 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.52□□□□□ -0.73
Foxa2P35583 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Foxa2P35583 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Foxa2P35583 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxa2P35583 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.51□□□□□ -0.73
Foxa2P35583 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Foxa2P35583 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Foxa2P35583 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.51□□□□□ -0.73
Foxa2P35583 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms