Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.59□□□□□ -0.55
Foxa1P35582 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Foxa1P35582 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 Gm29396-201ENSMUST00000185659 716 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 Olfr284-202ENSMUST00000206647 966 ntBASIC11.59□□□□□ -0.55
Foxa1P35582 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.59□□□□□ -0.55
Foxa1P35582 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.59□□□□□ -0.55
Foxa1P35582 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Foxa1P35582 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Foxa1P35582 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Foxa1P35582 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Foxa1P35582 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.58□□□□□ -0.56
Foxa1P35582 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Foxa1P35582 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Gm13875-201ENSMUST00000120162 282 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Gm13786-201ENSMUST00000122371 333 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxa1P35582 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.58□□□□□ -0.56
Foxa1P35582 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Foxa1P35582 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm9022-201ENSMUST00000182482 992 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm18935-201ENSMUST00000212692 664 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm7399-201ENSMUST00000032395 858 ntBASIC11.58□□□□□ -0.56
Foxa1P35582 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.58□□□□□ -0.56
Foxa1P35582 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.58□□□□□ -0.56
Foxa1P35582 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Foxa1P35582 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxa1P35582 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxa1P35582 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.57□□□□□ -0.56
Foxa1P35582 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.57□□□□□ -0.56
Foxa1P35582 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.57□□□□□ -0.56
Foxa1P35582 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.57□□□□□ -0.56
Foxa1P35582 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Foxa1P35582 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Foxa1P35582 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxa1P35582 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms