Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.66□□□□□ -0.54
Thbs1P35441 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Thbs1P35441 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.66□□□□□ -0.54
Thbs1P35441 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.65□□□□□ -0.54
Thbs1P35441 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.65□□□□□ -0.54
Thbs1P35441 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Thbs1P35441 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.65□□□□□ -0.54
Thbs1P35441 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Thbs1P35441 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Thbs1P35441 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Thbs1P35441 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Thbs1P35441 Gm37424-201ENSMUST00000191727 561 ntBASIC11.65□□□□□ -0.54
Thbs1P35441 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.65□□□□□ -0.54
Thbs1P35441 Gm10268-201ENSMUST00000085340 555 ntBASIC11.65□□□□□ -0.54
Thbs1P35441 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Thbs1P35441 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Thbs1P35441 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.65□□□□□ -0.54
Thbs1P35441 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Thbs1P35441 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Thbs1P35441 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Thbs1P35441 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Thbs1P35441 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Thbs1P35441 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 Gm24231-201ENSMUST00000104315 133 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Gm27682-201ENSMUST00000183930 110 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.64□□□□□ -0.55
Thbs1P35441 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.64□□□□□ -0.55
Thbs1P35441 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Thbs1P35441 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Thbs1P35441 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Thbs1P35441 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Thbs1P35441 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Thbs1P35441 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Thbs1P35441 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm13392-201ENSMUST00000117708 150 ntBASIC11.63□□□□□ -0.55
Thbs1P35441 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Thbs1P35441 Gm16177-201ENSMUST00000120728 718 ntBASIC11.63□□□□□ -0.55
Thbs1P35441 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms