Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Mir874-201ENSMUST00000104769 76 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.57□□□□□ -0.56
Sftpa1P35242 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm19287-201ENSMUST00000203190 358 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.57□□□□□ -0.56
Sftpa1P35242 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sftpa1P35242 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sftpa1P35242 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm12501-201ENSMUST00000119163 529 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.56□□□□□ -0.56
Sftpa1P35242 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm4607-201ENSMUST00000206649 577 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm21811-201ENSMUST00000096485 930 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.56□□□□□ -0.56
Sftpa1P35242 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.56□□□□□ -0.56
Sftpa1P35242 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sftpa1P35242 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sftpa1P35242 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sftpa1P35242 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms