Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rom1P32958 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rom1P32958 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rom1P32958 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.9□□□□□ -0.83
Rom1P32958 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rom1P32958 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.9□□□□□ -0.83
Rom1P32958 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.89□□□□□ -0.83
Rom1P32958 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm14350-201ENSMUST00000116642 640 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.89□□□□□ -0.83
Rom1P32958 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm21854-201ENSMUST00000179901 471 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Gm27618-201ENSMUST00000183671 60 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.89□□□□□ -0.83
Rom1P32958 Gm9063-201ENSMUST00000223299 582 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
Rom1P32958 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.89□□□□□ -0.83
Rom1P32958 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.89□□□□□ -0.83
Rom1P32958 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rom1P32958 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rom1P32958 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rom1P32958 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rom1P32958 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.88□□□□□ -0.83
Rom1P32958 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms