Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.54□□□□□ -0.56
Nedd8P29595 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.54□□□□□ -0.56
Nedd8P29595 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Nedd8P29595 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm18889-201ENSMUST00000174284 929 ntBASIC11.54□□□□□ -0.56
Nedd8P29595 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.54□□□□□ -0.56
Nedd8P29595 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nedd8P29595 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.54□□□□□ -0.56
Nedd8P29595 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nedd8P29595 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.54□□□□□ -0.56
Nedd8P29595 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.53□□□□□ -0.56
Nedd8P29595 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.53□□□□□ -0.56
Nedd8P29595 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.53□□□□□ -0.56
Nedd8P29595 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.53□□□□□ -0.56
Nedd8P29595 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nedd8P29595 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.53□□□□□ -0.56
Nedd8P29595 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Nedd8P29595 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nedd8P29595 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Nedd8P29595 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.52□□□□□ -0.56
Nedd8P29595 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.52□□□□□ -0.56
Nedd8P29595 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nedd8P29595 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Nedd8P29595 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms