Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.61□□□□□ -0.55
Cd40lgP27548 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm27514-201ENSMUST00000183692 110 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm19184-201ENSMUST00000196798 928 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm8099-201ENSMUST00000200510 742 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm43630-201ENSMUST00000201550 776 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm6013-201ENSMUST00000212264 699 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.6□□□□□ -0.55
Cd40lgP27548 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cd40lgP27548 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cd40lgP27548 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.59□□□□□ -0.55
Cd40lgP27548 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cd40lgP27548 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms