Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm13570-201ENSMUST00000140763 309 ntBASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.91□□□□□ -0.34
Nfkb1P25799 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.91□□□□□ -0.34
Nfkb1P25799 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nfkb1P25799 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nfkb1P25799 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nfkb1P25799 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm13665-201ENSMUST00000120830 528 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm14017-201ENSMUST00000121934 386 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm24845-201ENSMUST00000158034 109 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.9□□□□□ -0.34
Nfkb1P25799 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm5363-201ENSMUST00000211927 938 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.9□□□□□ -0.34
Nfkb1P25799 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nfkb1P25799 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nfkb1P25799 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nfkb1P25799 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nfkb1P25799 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
Nfkb1P25799 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nfkb1P25799 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm14130-201ENSMUST00000118417 987 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm14832-201ENSMUST00000121289 322 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Gm25700-201ENSMUST00000177693 110 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms